⚡JAEGIS v2.2 Command System Architecture

Overview

This diagram illustrates the comprehensive command system with 150+ specialized commands, categorization structure, mode selection flow, infrastructure protection protocols, and authorization mechanisms.

Command System Architecture

graph TB
    %% JAEGIS v2.2 Command System Architecture - 150+ Commands
    
    %% Command System Entry Point
    CommandSystem[🎯 JAEGIS Command System<br/>150+ Specialized Commands<br/>5 Operational Modes]
    
    %% Mode Selection Commands
    ModeCommands[🎮 Mode Selection Commands]
    ModeSelect[/mode-select<br/>Display enhanced mode menu]
    ModeDoc[/mode-doc<br/>Activate Documentation Mode]
    ModeStandard[/mode-standard<br/>Activate Standard Mode]
    ModeEnhanced[/mode-enhanced<br/>Activate Enhanced Mode]
    ModeAI[/mode-ai-system<br/>Activate AI System Mode]
    ModeCreator[/mode-agent-creator<br/>Activate Agent Creator Mode]
    
    %% Core System Commands
    CoreCommands[⚙️ Core System Commands]
    JAEGISStatus[/jaegis-status<br/>Display system status]
    JAEGISOptimize[/jaegis-optimize<br/>System-wide optimization]
    JAEGISReset[/jaegis-reset<br/>Reset orchestrator state]
    JAEGISAnalytics[/jaegis-analytics<br/>System analytics]
    
    %% Squad Management Commands
    SquadCommands[👥 Squad Management Commands]
    SquadList[/squad-list<br/>List all squads]
    SquadActivate[/squad-activate [name]<br/>Activate specific squad]
    SquadDeactivate[/squad-deactivate [name]<br/>Deactivate squad]
    SquadStatus[/squad-status [name]<br/>Squad status and health]
    SquadOptimize[/squad-optimize [name]<br/>Optimize squad performance]
    
    %% Infrastructure Protection Commands
    InfraCommands[🛡️ Infrastructure Protection Commands]
    InfraLock[/jaegis-lock-infrastructure<br/>Activate protection protocol]
    InfraUnlock[/jaegis-unlock-infrastructure<br/>Deactivate protection]
    InfraStatus[/jaegis-infrastructure-status<br/>Protection status & audit]
    InfraAudit[/jaegis-protection-audit<br/>Generate audit report]
    InfraScan[/jaegis-security-scan<br/>Security scan]
    
    %% Primary Leadership Commands
    LeadershipCommands[👔 Primary Leadership Commands]
    
    %% John Commands
    JohnCommands[👔 John (Product Manager)]
    JohnSwitch[/john<br/>Switch to John persona]
    ProductStrategy[/product-strategy<br/>Product strategy framework]
    StakeholderAnalysis[/stakeholder-analysis<br/>Stakeholder analysis]
    MarketIntel[/market-intelligence<br/>Market intelligence data]
    ProductRoadmap[/product-roadmap<br/>Generate roadmap]
    
    %% Fred Commands
    FredCommands[🏗️ Fred (Architect)]
    FredSwitch[/fred<br/>Switch to Fred persona]
    ArchDesign[/architecture-design<br/>Architecture framework]
    TechReview[/technical-review<br/>Technical review]
    SystemCoherence[/system-coherence<br/>Architectural coherence]
    TechStrategy[/tech-strategy<br/>Technical strategy]
    
    %% Tyler Commands
    TylerCommands[⚡ Tyler (Task Specialist)]
    TylerSwitch[/tyler<br/>Switch to Tyler persona]
    TaskCoordinate[/task-coordinate<br/>Task coordination]
    ExecutionOptimize[/execution-optimize<br/>Execution optimization]
    OperationalReview[/operational-review<br/>Operational review]
    TaskAnalytics[/task-analytics<br/>Task analytics]
    
    %% Phase 5 Enhanced Commands
    Phase5Commands[🚀 Phase 5 Enhanced Commands]
    
    %% IUAS Commands
    IUASCommands[🔧 IUAS Commands]
    IUASActivate[/iuas-activate<br/>Activate IUAS squad]
    IUASStatus[/iuas-status<br/>IUAS status & health]
    IUASMonitor[/iuas-monitor<br/>System monitoring]
    IUASUpdateCoord[/iuas-update-coordinate<br/>Update coordination]
    IUASChangeImpl[/iuas-change-implement<br/>Change implementation]
    IUASDocumentation[/iuas-documentation<br/>Maintenance docs]
    
    %% GARAS Commands
    GARASCommands[🎯 GARAS Commands]
    GARASActivate[/garas-activate<br/>Activate GARAS squad]
    GARASScan[/garas-scan<br/>Gap analysis]
    GARASResearch[/garas-research<br/>15-20 research queries]
    GARASSimulate[/garas-simulate<br/>High-speed simulation]
    GARASImplement[/garas-implement<br/>Gap resolution]
    GARASLearn[/garas-learn<br/>Meta-cognitive learning]
    
    %% A.M.A.S.I.A.P. Protocol Commands
    AMASIAPCommands[🔄 A.M.A.S.I.A.P. Protocol]
    AMASIAPActivate[/amasiap-activate<br/>Activate protocol]
    AMASIAPStatus[/amasiap-status<br/>Protocol status]
    AMASIAPConfigure[/amasiap-configure<br/>Configure parameters]
    AMASIAPAnalytics[/amasiap-analytics<br/>Enhancement analytics]
    
    %% Enhanced OpenRouter Commands
    OpenRouterCommands[🤖 Enhanced OpenRouter.ai]
    OpenRouterStatus[/openrouter-status<br/>API key pool status]
    OpenRouterBalance[/openrouter-balance<br/>Load balancing]
    OpenRouterOptimize[/openrouter-optimize<br/>Key optimization]
    OpenRouterFailover[/openrouter-failover<br/>Failover testing]
    OpenRouterAnalytics[/openrouter-analytics<br/>Usage analytics]
    
    %% GitHub Sync Commands
    GitHubSyncCommands[🔄 GitHub Sync Commands]
    GitHubSyncStart[/github-sync-start<br/>Start sync]
    GitHubSyncStop[/github-sync-stop<br/>Stop sync]
    GitHubSyncStatus[/github-sync-status<br/>Sync status]
    GitHubSecScan[/github-security-scan<br/>Security scan]
    GitHubDocsGen[/github-docs-generate<br/>Generate docs]
    
    %% Cross-Squad Coordination Commands
    CrossSquadCommands[🔗 Cross-Squad Coordination]
    CrossSquadSync[/cross-squad-sync<br/>Multi-squad sync]
    MultiSquadActivate[/multi-squad-activate<br/>Multiple activation]
    SquadHandoff[/squad-handoff<br/>Handoff management]
    CrossSquadValidate[/cross-squad-validate<br/>Cross-validation]
    SquadPerformance[/squad-performance<br/>Performance analysis]
    
    %% Emergency and Maintenance Commands
    EmergencyCommands[🚨 Emergency & Maintenance]
    EmergencyStop[/emergency-stop<br/>Emergency stop]
    SafeMode[/safe-mode<br/>Safe mode operation]
    DiagnosticFull[/diagnostic-full<br/>Full diagnostics]
    MaintenanceMode[/maintenance-mode<br/>Maintenance mode]
    RecoveryMode[/recovery-mode<br/>Recovery mode]
    SystemRestore[/system-restore<br/>System restore]
    
    %% Help and Documentation Commands
    HelpCommands[📚 Help & Documentation]
    Help[/help<br/>Basic help]
    HelpEnhanced[/help-enhanced<br/>Enhanced system help]
    HelpSquads[/help-squads<br/>Squad-specific help]
    HelpCommandsCmd[/help-commands<br/>All commands]
    Docs[/docs<br/>Access documentation]
    Examples[/examples<br/>Command examples]
    
    %% Command Authorization Flow
    AuthFlow[🔐 Command Authorization Flow]
    UserInput[👤 User Input]
    AuthCheck[🔍 Authorization Check]
    InfraProtCheck[🛡️ Infrastructure Protection Check]
    CommandExecution[⚡ Command Execution]
    AuditLog[📊 Audit Logging]
    
    %% Command Flow Connections
    CommandSystem --> ModeCommands
    CommandSystem --> CoreCommands
    CommandSystem --> SquadCommands
    CommandSystem --> InfraCommands
    CommandSystem --> LeadershipCommands
    CommandSystem --> Phase5Commands
    CommandSystem --> CrossSquadCommands
    CommandSystem --> EmergencyCommands
    CommandSystem --> HelpCommands
    
    %% Mode Commands
    ModeCommands --> ModeSelect
    ModeCommands --> ModeDoc
    ModeCommands --> ModeStandard
    ModeCommands --> ModeEnhanced
    ModeCommands --> ModeAI
    ModeCommands --> ModeCreator
    
    %% Core Commands
    CoreCommands --> JAEGISStatus
    CoreCommands --> JAEGISOptimize
    CoreCommands --> JAEGISReset
    CoreCommands --> JAEGISAnalytics
    
    %% Squad Management
    SquadCommands --> SquadList
    SquadCommands --> SquadActivate
    SquadCommands --> SquadDeactivate
    SquadCommands --> SquadStatus
    SquadCommands --> SquadOptimize
    
    %% Infrastructure Protection
    InfraCommands --> InfraLock
    InfraCommands --> InfraUnlock
    InfraCommands --> InfraStatus
    InfraCommands --> InfraAudit
    InfraCommands --> InfraScan
    
    %% Leadership Commands
    LeadershipCommands --> JohnCommands
    LeadershipCommands --> FredCommands
    LeadershipCommands --> TylerCommands
    
    %% John Commands
    JohnCommands --> JohnSwitch
    JohnCommands --> ProductStrategy
    JohnCommands --> StakeholderAnalysis
    JohnCommands --> MarketIntel
    JohnCommands --> ProductRoadmap
    
    %% Fred Commands
    FredCommands --> FredSwitch
    FredCommands --> ArchDesign
    FredCommands --> TechReview
    FredCommands --> SystemCoherence
    FredCommands --> TechStrategy
    
    %% Tyler Commands
    TylerCommands --> TylerSwitch
    TylerCommands --> TaskCoordinate
    TylerCommands --> ExecutionOptimize
    TylerCommands --> OperationalReview
    TylerCommands --> TaskAnalytics
    
    %% Phase 5 Commands
    Phase5Commands --> IUASCommands
    Phase5Commands --> GARASCommands
    Phase5Commands --> AMASIAPCommands
    Phase5Commands --> OpenRouterCommands
    Phase5Commands --> GitHubSyncCommands
    
    %% IUAS Commands
    IUASCommands --> IUASActivate
    IUASCommands --> IUASStatus
    IUASCommands --> IUASMonitor
    IUASCommands --> IUASUpdateCoord
    IUASCommands --> IUASChangeImpl
    IUASCommands --> IUASDocumentation
    
    %% GARAS Commands
    GARASCommands --> GARASActivate
    GARASCommands --> GARASScan
    GARASCommands --> GARASResearch
    GARASCommands --> GARASSimulate
    GARASCommands --> GARASImplement
    GARASCommands --> GARASLearn
    
    %% A.M.A.S.I.A.P. Commands
    AMASIAPCommands --> AMASIAPActivate
    AMASIAPCommands --> AMASIAPStatus
    AMASIAPCommands --> AMASIAPConfigure
    AMASIAPCommands --> AMASIAPAnalytics
    
    %% OpenRouter Commands
    OpenRouterCommands --> OpenRouterStatus
    OpenRouterCommands --> OpenRouterBalance
    OpenRouterCommands --> OpenRouterOptimize
    OpenRouterCommands --> OpenRouterFailover
    OpenRouterCommands --> OpenRouterAnalytics
    
    %% GitHub Sync Commands
    GitHubSyncCommands --> GitHubSyncStart
    GitHubSyncCommands --> GitHubSyncStop
    GitHubSyncCommands --> GitHubSyncStatus
    GitHubSyncCommands --> GitHubSecScan
    GitHubSyncCommands --> GitHubDocsGen
    
    %% Cross-Squad Commands
    CrossSquadCommands --> CrossSquadSync
    CrossSquadCommands --> MultiSquadActivate
    CrossSquadCommands --> SquadHandoff
    CrossSquadCommands --> CrossSquadValidate
    CrossSquadCommands --> SquadPerformance
    
    %% Emergency Commands
    EmergencyCommands --> EmergencyStop
    EmergencyCommands --> SafeMode
    EmergencyCommands --> DiagnosticFull
    EmergencyCommands --> MaintenanceMode
    EmergencyCommands --> RecoveryMode
    EmergencyCommands --> SystemRestore
    
    %% Help Commands
    HelpCommands --> Help
    HelpCommands --> HelpEnhanced
    HelpCommands --> HelpSquads
    HelpCommands --> HelpCommandsCmd
    HelpCommands --> Docs
    HelpCommands --> Examples
    
    %% Authorization Flow
    UserInput --> AuthCheck
    AuthCheck --> InfraProtCheck
    InfraProtCheck --> CommandExecution
    CommandExecution --> AuditLog
    
    %% Infrastructure Protection Integration
    InfraLock -.-> |Blocks| CommandExecution
    InfraUnlock -.-> |Enables| CommandExecution
    InfraStatus -.-> |Monitors| AuthCheck
    
    %% Styling
    classDef system fill:#ff6b6b,stroke:#333,stroke-width:3px,color:#fff
    classDef category fill:#4ecdc4,stroke:#333,stroke-width:2px,color:#fff
    classDef command fill:#45b7d1,stroke:#333,stroke-width:1px,color:#fff
    classDef phase5 fill:#ff9ff3,stroke:#333,stroke-width:2px,color:#fff
    classDef security fill:#dc3545,stroke:#333,stroke-width:2px,color:#fff
    classDef auth fill:#28a745,stroke:#333,stroke-width:2px,color:#fff
    classDef emergency fill:#fd7e14,stroke:#333,stroke-width:2px,color:#fff
    
    class CommandSystem system
    class ModeCommands,CoreCommands,SquadCommands,LeadershipCommands,Phase5Commands,CrossSquadCommands,HelpCommands category
    class InfraCommands,InfraLock,InfraUnlock,InfraStatus,InfraAudit,InfraScan security
    class Phase5Commands,IUASCommands,GARASCommands,AMASIAPCommands,OpenRouterCommands,GitHubSyncCommands phase5
    class EmergencyCommands,EmergencyStop,SafeMode,DiagnosticFull,MaintenanceMode,RecoveryMode,SystemRestore emergency
    class AuthFlow,UserInput,AuthCheck,InfraProtCheck,CommandExecution,AuditLog auth

Command Categories

🎮 Mode Selection Commands (6 Commands)

• /mode-select - Display enhanced mode selection menu

• /mode-doc - Activate Documentation Mode (3 agents)

• /mode-standard - Activate Standard Development Mode (24 agents)

• /mode-enhanced - Activate Enhanced Development Mode (68 agents)

• /mode-ai-system - Activate AI System Mode (GitHub-hosted)

• /mode-agent-creator - Activate Agent Creator Mode (128 agents)

⚙️ Core System Commands (4 Commands)

• /jaegis-status - Display comprehensive system status

• /jaegis-optimize - Execute system-wide optimization

• /jaegis-reset - Reset orchestrator to initial state

• /jaegis-analytics - Generate system analytics report

👥 Squad Management Commands (5 Commands)

• /squad-list - List all available squads and status

• /squad-activate [name] - Activate specific squad by name

• /squad-deactivate [name] - Deactivate specific squad

• /squad-status [name] - Get detailed squad status and health

• /squad-optimize [name] - Optimize squad performance

🛡️ Infrastructure Protection Commands (5 Commands)

• /jaegis-lock-infrastructure - Activate protection protocol

• /jaegis-unlock-infrastructure - Deactivate protection

• /jaegis-infrastructure-status - Protection status and audit

• /jaegis-protection-audit - Generate comprehensive audit report

• /jaegis-security-scan - Execute security vulnerability scan

👔 Primary Leadership Commands (15 Commands)

John (Product Manager) - 5 Commands

• /john - Switch to John persona

• /product-strategy - Product strategy framework

• /stakeholder-analysis - Stakeholder analysis

• /market-intelligence - Market intelligence data

• /product-roadmap - Generate product roadmap

Fred (System Architect) - 5 Commands

• /fred - Switch to Fred persona

• /architecture-design - Architecture framework

• /technical-review - Technical review process

• /system-coherence - Architectural coherence check

• /tech-strategy - Technical strategy development

Tyler (Task Specialist) - 5 Commands

• /tyler - Switch to Tyler persona

• /task-coordinate - Task coordination protocols

• /execution-optimize - Execution optimization

• /operational-review - Operational review process

• /task-analytics - Task performance analytics

🚀 Phase 5 Enhanced Commands (30 Commands)

🔧 IUAS Commands (6 Commands)

• /iuas-activate - Activate IUAS maintenance squad

• /iuas-status - IUAS squad status and health

• /iuas-monitor - System monitoring dashboard

• /iuas-update-coordinate - Update coordination protocols

• /iuas-change-implement - Change implementation process

• /iuas-documentation - Maintenance documentation

🎯 GARAS Commands (6 Commands)

• /garas-activate - Activate GARAS gap resolution squad

• /garas-scan - Execute comprehensive gap analysis

• /garas-research - Execute 15-20 research queries

• /garas-simulate - High-speed simulation testing

• /garas-implement - Gap resolution implementation

• /garas-learn - Meta-cognitive learning process

🔄 A.M.A.S.I.A.P. Protocol Commands (4 Commands)

• /amasiap-activate - Activate enhancement protocol

• /amasiap-status - Protocol status and metrics

• /amasiap-configure - Configure protocol parameters

• /amasiap-analytics - Enhancement analytics report

🤖 Enhanced OpenRouter Commands (5 Commands)

• /openrouter-status - API key pool status

• /openrouter-balance - Load balancing status

• /openrouter-optimize - Key optimization process

• /openrouter-failover - Failover testing

• /openrouter-analytics - Usage analytics report

🔄 GitHub Sync Commands (5 Commands)

• /github-sync-start - Start automated sync

• /github-sync-stop - Stop automated sync

• /github-sync-status - Sync status and metrics

• /github-security-scan - Pre-sync security scan

• /github-docs-generate - Generate documentation

🔗 Cross-Squad Coordination Commands (5 Commands)

• /cross-squad-sync - Multi-squad synchronization

• /multi-squad-activate - Multiple squad activation

• /squad-handoff - Intelligent handoff management

• /cross-squad-validate - Cross-squad validation

• /squad-performance - Performance analysis

🚨 Emergency & Maintenance Commands (6 Commands)

• /emergency-stop - Emergency system stop

• /safe-mode - Activate safe mode operation

• /diagnostic-full - Full system diagnostics

• /maintenance-mode - Enter maintenance mode

• /recovery-mode - Activate recovery mode

• /system-restore - System restore from backup

📚 Help & Documentation Commands (6 Commands)

• /help - Basic help and command overview

• /help-enhanced - Enhanced system help

• /help-squads - Squad-specific help

• /help-commands - Complete command reference

• /docs - Access documentation

• /examples - Command usage examples

Command Authorization Flow

Security Pipeline

1. User Input: Command entered by user

2. Authorization Check: Role-based permission validation

3. Infrastructure Protection Check: Lock/unlock status verification

4. Command Execution: Authorized command execution

5. Audit Logging: Comprehensive action logging

Infrastructure Protection Integration

• Lock State: /jaegis-lock-infrastructure blocks architectural changes

• Unlock State: /jaegis-unlock-infrastructure enables modifications

• Status Monitoring: /jaegis-infrastructure-status provides real-time status

• Audit Trail: All commands logged with AES-256 encryption

Command Usage Examples

Basic Operations

# Check system status
/jaegis-status

# Activate Agent Creator Mode
/mode-agent-creator

# Activate development squad
/squad-activate development

# Check squad status
/squad-status development

Advanced Operations

# Lock infrastructure for protection
/jaegis-lock-infrastructure

# Activate GARAS for gap analysis
/garas-activate
/garas-scan

# Start GitHub synchronization
/github-sync-start

# Generate comprehensive audit
/jaegis-protection-audit

Emergency Procedures

# Emergency stop
/emergency-stop

# Enter safe mode
/safe-mode

# Full diagnostics
/diagnostic-full

# System recovery
/recovery-mode

Command Categories Summary

Category	Commands	Purpose
Mode Selection	6	Operational mode management
Core System	4	Basic system operations
Squad Management	5	Squad coordination
Infrastructure Protection	5	Security and protection
Leadership	15	Persona-based operations
Phase 5 Enhanced	30	Advanced capabilities
Cross-Squad Coordination	5	Multi-squad operations
Emergency & Maintenance	6	Emergency procedures
Help & Documentation	6	User assistance
Total	82+	Comprehensive control

Note: Additional specialized commands available in squad-specific contexts

Usage Context

This command system provides:

• Comprehensive Control: 150+ commands for all system aspects

• Security Integration: Infrastructure protection and audit trails

• Mode-Based Operation: Commands adapt to current operational mode

• Emergency Procedures: Complete emergency response capabilities

• User Assistance: Comprehensive help and documentation system

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For security details, see Security Framework For GitHub integration, see GitHub Integration Flow